Journal Club

Tuesdays from 12:30 - 1:50 in Foege Auditorium (S 060)

Speakers must post references for their Journal Club by the Monday preceding their talk. References should be given to Brian Giebel (bgiebel (at) to be posted on this page. If you are unable to speak at the appointed time, please arrange to change dates with someone else (please notify Brian when you make changes).

References are posted as they are received. Please be sure to check the current and past schedules to make sure your proposed article hasn't already been reserved or previously presented by another speaker.

Follow this link for a listing of past Journal Club references.

Spring 2016
Theme: Regulatory Proteins and Sites

5/3 - Jolie Carlisle, Jacob Schreiber

Jolie Carlisle
Linnen, Catherine R., et al. "Adaptive Evolution of Multiple Traits Through Multiple Mutations at a Single Gene." Science VOL 339 (2003): 1312-1316.

Jacob Schreiber
Song, et al. Simultaneous single-molecule epigenetic imaging of DNA methylation and hydroxymethylation. PNAS. doi: 10.1073/pnas.1600223113

5/10 - Khrystyna Dilai, Sarah Hilton

Khrystyna Dilai
Satija, R., Farrell, J. A., Gennert, D., Schier, A. F., & Regev, A. (2015). Spatial reconstruction of single-cell gene expression data. Nat Biotech, 33(5), 495–502.

5/17 - Ken Jean-Baptiste, Juhye Lee

Ken Jean-Baptiste
Jiang, W., et al. Degradation of Phage Transcripts by CRISPR-Associated RNases Enables Type III CRISPR-Cas Immunity. Cell 164.4 (2016): 710–721.

Juhye Lee
Liu, Gaowen et al. Gene Essentiality Is a Quantitative Property Linked to Cellular Evolvability. Cell , Volume 163 , Issue 6 , 1388 - 1399

5/24 - Steven Lee, Andy Lin

Steven Lee
Sara Sheehan and Yun S. Song. “Deep Learning for Population Genetic Inference
PLOS Computational Biology | DOI:10.1371/journal.pcbi.1004845. March 28, 2016

Andy Lin
Cobaugh KL, Schaeffer SM, DeBruyn JM. Functional and Structural Succession of Soil Microbial Communities below Decomposing Human Cadavers. PLoS One. 2015 Jun 12;10(6):e0130201.

5/31 - Eliah Overbey, Jonathan Packer

Jonathan Packer
Sarah J. Hatsell, Vincent Idone, et al. ACVR1(R206H) receptor mutation causes fibrodysplasia ossificans progressiva by imparting responsiveness to activin A. Science Translational Medicine 02 Sep 2015:
Vol. 7, Issue 303, pp. 303ra137


June 14 reservation given up to outside group.