Tuesdays from 12:30 - 1:50 in Foege Auditorium (S 060)
Speakers must post references for their Journal Club by the Monday preceding their talk. References should be given to Brian Giebel (bgiebel
(at) u.washington.edu) to be posted on this page. If you are unable to speak at the appointed time, please arrange to change dates with someone else (please notify Brian when you make changes).
References are posted as they are received. Please be sure to check the current and past schedules to make sure your proposed article hasn't already been reserved or previously presented by another speaker.
Follow this link for a listing of past Journal Club references.
Theme: Regulatory Proteins and Sites
5/3 - Jolie Carlisle, Jacob Schreiber
Linnen, Catherine R., et al. "Adaptive Evolution of Multiple Traits Through Multiple Mutations at a Single Gene." Science VOL 339 (2003): 1312-1316.
Song, et al. Simultaneous single-molecule epigenetic imaging of DNA methylation and hydroxymethylation. PNAS. doi: 10.1073/pnas.1600223113
5/10 - Khrystyna Dilai, Sarah Hilton
Satija, R., Farrell, J. A., Gennert, D., Schier, A. F., & Regev, A. (2015). Spatial reconstruction of single-cell gene expression data. Nat Biotech, 33(5), 495–502.
5/17 - Ken Jean-Baptiste, Juhye Lee
Jiang, W., et al. Degradation of Phage Transcripts by CRISPR-Associated RNases Enables Type III CRISPR-Cas Immunity. Cell 164.4 (2016): 710–721.
Liu, Gaowen et al. Gene Essentiality Is a Quantitative Property Linked to Cellular Evolvability. Cell , Volume 163 , Issue 6 , 1388 - 1399
5/24 - Steven Lee, Andy Lin
Sara Sheehan and Yun S. Song. “Deep Learning for Population Genetic Inference”
PLOS Computational Biology | DOI:10.1371/journal.pcbi.1004845. March 28, 2016
Cobaugh KL, Schaeffer SM, DeBruyn JM. Functional and Structural Succession of Soil Microbial Communities below Decomposing Human Cadavers. PLoS One. 2015 Jun 12;10(6):e0130201.
5/31 - Eliah Overbey, Jonathan Packer
Sarah J. Hatsell, Vincent Idone, et al. ACVR1(R206H) receptor mutation causes fibrodysplasia ossificans progressiva by imparting responsiveness to activin A. Science Translational Medicine 02 Sep 2015:
Vol. 7, Issue 303, pp. 303ra137
June 14 reservation given up to outside group.